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        <title>MARMOSET</title>
        <description></description>
        <link>http://marmoset.jthaler.net/wiki/</link>
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       <dc:date>2010-09-04T14:15:23-04:00</dc:date>
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                <rdf:li rdf:resource="http://marmoset.jthaler.net/wiki/doku.php?id=bug_reports&amp;rev=1173230368&amp;do=diff"/>
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                <rdf:li rdf:resource="http://marmoset.jthaler.net/wiki/doku.php?id=oset_format&amp;rev=1177555544&amp;do=diff"/>
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                <rdf:li rdf:resource="http://marmoset.jthaler.net/wiki/doku.php?id=rundir_files&amp;rev=1173231763&amp;do=diff"/>
                <rdf:li rdf:resource="http://marmoset.jthaler.net/wiki/doku.php?id=seminars&amp;rev=1178213588&amp;do=diff"/>
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        <title>MARMOSET</title>
        <link>http://marmoset.jthaler.net/wiki/</link>
        <url>http://marmoset.jthaler.net/wiki/lib/images/favicon.ico</url>
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    <item rdf:about="http://marmoset.jthaler.net/wiki/doku.php?id=bug_reports&amp;rev=1173230368&amp;do=diff">
        <dc:format>text/html</dc:format>
        <dc:date>2007-03-06T20:19:28-04:00</dc:date>
        <title>bug_reports</title>
        <link>http://marmoset.jthaler.net/wiki/doku.php?id=bug_reports&amp;rev=1173230368&amp;do=diff</link>
        <description>If you find bugs, please let us know and post a brief description here so that other users will be warned.  Thanks.


	*  No known (user) bugs!</description>
    </item>
    <item rdf:about="http://marmoset.jthaler.net/wiki/doku.php?id=dependencies&amp;rev=1166422444&amp;do=diff">
        <dc:format>text/html</dc:format>
        <dc:date>2006-12-18T01:14:04-04:00</dc:date>
        <title>dependencies</title>
        <link>http://marmoset.jthaler.net/wiki/doku.php?id=dependencies&amp;rev=1166422444&amp;do=diff</link>
        <description>MARMOSET Dependencies

HPGS


HPGS is our detector simulator.  It's based on John Conway's PGS 3 after considerable hacking by Steve Mrenna for the LHC olympics last winter.  John Conway released a significantly improved new version this summer, with some bug fixes, code cleanup , and a trigger table, but the only jet algorithm he implemented was kT jets, which are supposed to be great for QCD but in hard scattering events they don't reconstruct the partons they came from as well as cone jets.  …</description>
    </item>
    <item rdf:about="http://marmoset.jthaler.net/wiki/doku.php?id=executables&amp;rev=1254950427&amp;do=diff">
        <dc:format>text/html</dc:format>
        <dc:date>2009-10-07T17:20:27-04:00</dc:date>
        <title>executables</title>
        <link>http://marmoset.jthaler.net/wiki/doku.php?id=executables&amp;rev=1254950427&amp;do=diff</link>
        <description>Note, Marmoset1/bin should be added to your $PATH.  For the most part, all executables should be run from a runDir directory.  See the help files on workflow to learn how to perform an OSET analysis and use the exec in practice.  Usage is displayed for all scripts by typing the executable name and pressing enter.</description>
    </item>
    <item rdf:about="http://marmoset.jthaler.net/wiki/doku.php?id=feature_requests&amp;rev=1173230440&amp;do=diff">
        <dc:format>text/html</dc:format>
        <dc:date>2007-03-06T20:20:40-04:00</dc:date>
        <title>feature_requests</title>
        <link>http://marmoset.jthaler.net/wiki/doku.php?id=feature_requests&amp;rev=1173230440&amp;do=diff</link>
        <description>If you wish to make a feature request, please let us know and post a brief description here.  Thanks.


	*  Spin information in cascade decays.</description>
    </item>
    <item rdf:about="http://marmoset.jthaler.net/wiki/doku.php?id=fitting&amp;rev=1166408670&amp;do=diff">
        <dc:format>text/html</dc:format>
        <dc:date>2006-12-17T21:24:30-04:00</dc:date>
        <title>fitting</title>
        <link>http://marmoset.jthaler.net/wiki/doku.php?id=fitting&amp;rev=1166408670&amp;do=diff</link>
        <description>*FITTING WITH fitOSET_C
We are still trying to decide how to define the “best fit”
parameters and their errors, and the best algorithm for fitting.
The core functionality of fitOSET_C is written in c++.
*OVERVIEW*
fitOSET_C fits the parameters of an OSET to a monte carlo by minimizing
a chi-squared-like variable whose “bins” are the counts in each
signature. The signature counts of the monte carlo are referred to as
the targetvector.  fitOSET_C performs the minimization from 
several different s…</description>
    </item>
    <item rdf:about="http://marmoset.jthaler.net/wiki/doku.php?id=installing&amp;rev=1212029651&amp;do=diff">
        <dc:format>text/html</dc:format>
        <dc:date>2008-05-28T22:54:11-04:00</dc:date>
        <title>installing</title>
        <link>http://marmoset.jthaler.net/wiki/doku.php?id=installing&amp;rev=1212029651&amp;do=diff</link>
        <description>There are currently two somewhat different installation options for Marmoset, depending on how you want to use it.


	*  If you want to interface with PGS, you probably want to follow the  ORIGINAL MODE instructions.  These installation instructions also download Pythia 6, STDHEP, two versions of PGS, and a private root-based plotting tool (see description of dependencies below) 
	*  If you only want to generate STDHEP or Les Houches format events in Marmoset, and want to download less code, ple…</description>
    </item>
    <item rdf:about="http://marmoset.jthaler.net/wiki/doku.php?id=marmoset&amp;rev=1195438368&amp;do=diff">
        <dc:format>text/html</dc:format>
        <dc:date>2007-11-18T21:12:48-04:00</dc:date>
        <title>marmoset</title>
        <link>http://marmoset.jthaler.net/wiki/doku.php?id=marmoset&amp;rev=1195438368&amp;do=diff</link>
        <description>Mass And Rate Modeling in On-Shell Effective Theories

Marmoset is a strategy and a set of tools for characterizing and
fitting physics beyond the Standard Model in a model-independent
scheme. We introduce the idea of On-Shell Effective Theories
(OSETs), which provide a flexible framework in which to describe new
physics in terms of just the masses, production modes, and decay
modes of candidate new particles. OSETs are well-suited for Monte Carlo-based
analysis and interpretation of new physics…</description>
    </item>
    <item rdf:about="http://marmoset.jthaler.net/wiki/doku.php?id=matrix_elements&amp;rev=1173231605&amp;do=diff">
        <dc:format>text/html</dc:format>
        <dc:date>2007-03-06T20:40:05-04:00</dc:date>
        <title>matrix_elements</title>
        <link>http://marmoset.jthaler.net/wiki/doku.php?id=matrix_elements&amp;rev=1173231605&amp;do=diff</link>
        <description>Currently, Marmoset can only handle 2-&gt;1 (Breit-Wigner), 2-&gt;2 (in a power series in X and ξ), and limited2-&gt;3 hard scattering matrix elements.

It is possible for the user to hard code new matrix elements as needed.  The code that controls the matrix element definitions for 2-&gt;1, 2-&gt;2, and 2-&gt;3 processes is in Marmoset/src/pysgge.f</description>
    </item>
    <item rdf:about="http://marmoset.jthaler.net/wiki/doku.php?id=oset_format&amp;rev=1177555544&amp;do=diff">
        <dc:format>text/html</dc:format>
        <dc:date>2007-04-25T22:45:44-04:00</dc:date>
        <title>oset_format</title>
        <link>http://marmoset.jthaler.net/wiki/doku.php?id=oset_format&amp;rev=1177555544&amp;do=diff</link>
        <description>This is a beta feature that does not work fully.

Every OSET file must specify information for how Monte Carlo should be generated.  The format is


 : accelerator=LHC detector=LHE trigger=L0 montecarlo=Pythia ifsr=on multiint=off mglevel=0


Note the initial ”:”.  A line with just ”:” will use default parameter values.</description>
    </item>
    <item rdf:about="http://marmoset.jthaler.net/wiki/doku.php?id=physics&amp;rev=1173230254&amp;do=diff">
        <dc:format>text/html</dc:format>
        <dc:date>2007-03-06T20:17:34-04:00</dc:date>
        <title>physics</title>
        <link>http://marmoset.jthaler.net/wiki/doku.php?id=physics&amp;rev=1173230254&amp;do=diff</link>
        <description>The Physics Behind Marmoset


With the upcoming turn-on of the Large Hadron Collider (LHC), high
energy physics is on the verge of entering its most exciting period in
a generation. How will we reconstruct the fundamental theory of the
electroweak scale from LHC data?  The major discoveries at hadron
colliders in the last thirty years---those of the W and Z bosons and
the top quark---were of particles
whose properties were exactly predicted by the Standard Model (for the
W and Z) or characterize…</description>
    </item>
    <item rdf:about="http://marmoset.jthaler.net/wiki/doku.php?id=rundir_files&amp;rev=1173231763&amp;do=diff">
        <dc:format>text/html</dc:format>
        <dc:date>2007-03-06T20:42:43-04:00</dc:date>
        <title>rundir_files</title>
        <link>http://marmoset.jthaler.net/wiki/doku.php?id=rundir_files&amp;rev=1173231763&amp;do=diff</link>
        <description>The osets/ folder contains all of the OSET files.  There is a osets/par subdirectory that can store pythia card 
files, but it is not currently in use.  All OSET files must end with .oset.


When you run parseOSET, .oset files are converted to meta files that store all of the information necessary to generate monte carlo and match rates.  There are three files.</description>
    </item>
    <item rdf:about="http://marmoset.jthaler.net/wiki/doku.php?id=seminars&amp;rev=1178213588&amp;do=diff">
        <dc:format>text/html</dc:format>
        <dc:date>2007-05-03T13:33:08-04:00</dc:date>
        <title>seminars</title>
        <link>http://marmoset.jthaler.net/wiki/doku.php?id=seminars&amp;rev=1178213588&amp;do=diff</link>
        <description>*  The &quot;Section 6&quot; Problem:  Jesse Thaler, West Coast LHC Theory Network, UC Irvine, May 4th, 2007
	*  Uncovering the New Standard Model at the LHC:  Philip Schuster, Thesis defense at Harvard, April 25, 2007. 
	*  Physics working group meeting at LPC, FNAL, April 19, 2007  
		*  On-Shell Effective Theories: The Physics:  Philip Schuster
		*  On-Shell Effective Theories: MC Tools and Analysis Applications:  Natalia Toro</description>
    </item>
    <item rdf:about="http://marmoset.jthaler.net/wiki/doku.php?id=tutorial&amp;rev=1173321327&amp;do=diff">
        <dc:format>text/html</dc:format>
        <dc:date>2007-03-07T21:35:27-04:00</dc:date>
        <title>tutorial</title>
        <link>http://marmoset.jthaler.net/wiki/doku.php?id=tutorial&amp;rev=1173321327&amp;do=diff</link>
        <description>In this tutorial, we will construct an LHC Olympics-style Black Box to analyze and then try to build an OSET to match that Black Box.  Please give us suggestions for usability!

Starting Point


We assume that MARMOSET is installed.  You should have about 30 executables in the ${BASE_DIR}/Marmoset/bin/ directory and about 5 executables in the ${BASE_DIR}/MPotato/bin/ directory.</description>
    </item>
    <item rdf:about="http://marmoset.jthaler.net/wiki/doku.php?id=wishlist&amp;rev=1177114944&amp;do=diff">
        <dc:format>text/html</dc:format>
        <dc:date>2007-04-20T20:22:24-04:00</dc:date>
        <title>wishlist</title>
        <link>http://marmoset.jthaler.net/wiki/doku.php?id=wishlist&amp;rev=1177114944&amp;do=diff</link>
        <description>The following is an internal wishlist for the Marmoset developers.  For everyone else, please use the feature request page.  The goal is to fix all Short Term issues by the January release.

Short Term (High Priority)

	*  Get LHE output to work.
	*  parseOSET seems to always create new .xxx files, making generateProcess think it needs to re-make MC.  Should only create files when they're different (not 100% sure this is the source of problem...but there's definitely a problem when I run both si…</description>
    </item>
    <item rdf:about="http://marmoset.jthaler.net/wiki/doku.php?id=workflow&amp;rev=1173321438&amp;do=diff">
        <dc:format>text/html</dc:format>
        <dc:date>2007-03-07T21:37:18-04:00</dc:date>
        <title>workflow</title>
        <link>http://marmoset.jthaler.net/wiki/doku.php?id=workflow&amp;rev=1173321438&amp;do=diff</link>
        <description>Please send us your bug reports!

If you are ever lost...


At any point, you can use issue the command


marmosetHelp


if you are lost.  It will give you a list of the relevant executables and options that you can use in the current directory.  Most executables must be run from a valid runDir.</description>
    </item>
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